The issue is indeed the extra length-1 time dimension in Mean_Vari_Qtiles_Dust_TOTAL_conc_sfc_26aer_2008jul.nc which CIS tries to interpolate over - leading to the NaN. You're right that the nearest neighbour approach would have fixed this, but for some reason this option isn't getting passed through correctly - I've raised an issue for this here: https://jira.ceh.ac.uk/browse/JASCIS-410.
Then the following worked for me: cis col Mean:/home/users/myoshioka/temp/Mean_Vari_Qtiles_Dust_TOTAL_conc_sfc_26aer_2008jul.nc:product=squeeze_netcdf /home/users/myoshioka/temp/AOT_440_Izana_2008-07_monave_nco.nc:product=cis -o Means_Dust_TOTAL_conc_sfc_26aer_2008jul_Izana.nc
Thank you. How do I use squeeze_netcdf? I copied it in my plugin directory. Should I somehow specify this in .bashrc ? Currently it gives me an error when I try to use it.
Hi Masaru, sorry for the delay in replying.
The issue is indeed the extra length-1 time dimension in Mean_Vari_Qtiles_Dust_TOTAL_conc_sfc_26aer_2008jul.nc which CIS tries to interpolate over - leading to the NaN. You're right that the nearest neighbour approach would have fixed this, but for some reason this option isn't getting passed through correctly - I've raised an issue for this here: https://jira.ceh.ac.uk/browse/JASCIS-410.
I have a plugin which removes these length-1 dimensions when I don't want them here which might be useful: https://github.com/duncanwp/cis_plugins/blob/master/squeeze-netcdf.py
Then the following worked for me: cis col Mean:/home/users/myoshioka/temp/Mean_Vari_Qtiles_Dust_TOTAL_conc_sfc_26aer_2008jul.nc:product=squeeze_netcdf /home/users/myoshioka/temp/AOT_440_Izana_2008-07_monave_nco.nc:product=cis -o Means_Dust_TOTAL_conc_sfc_26aer_2008jul_Izana.nc
Hi Duncan,
Thank you. How do I use squeeze_netcdf? I copied it in my plugin directory. Should I somehow specify this in .bashrc ? Currently it gives me an error when I try to use it.
Masaru